Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATCGACCCAGCTGGAT
.(.((((((.(((((..(((.&)))..))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016018
GeneSymbolPHF20L1
Binding site757,776
Score0.846
Seed0
Au0.5
Energy-21.4
Binding len19
Me-6.826
Phylopstem3.327583333333333
Phylopflank3.3344381863750003
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure