Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAACAGCTGCAGCTTTGGGCAT
.(((((((((((((((..((.&))..))))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016019
GeneSymbolLUC7L2
Binding site1885,1909
Score1.0
Seed1
Au0.603
Energy-23.5
Binding len24
Me-3.793
Phylopstem1.7112551052631582
Phylopflank1.61199068625
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure