Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTGTGTGCTAGGA
.(((((((((((((.(......&).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016021
GeneSymbolUBE2J1
Binding site2977,2993
Score0.923
Seed1
Au0.426
Energy-20.6
Binding len16
Me-4.529
Phylopstem2.906623307692308
Phylopflank2.4156399950000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure