Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCCGCTGCAGCCGGCAGA
((((.((((((((.(((....&))).))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016026
GeneSymbolRDH11
Binding site41,60
Score0.846
Seed0
Au0.353
Energy-20.8
Binding len19
Me-8.913
Phylopstem1.162704875
Phylopflank0.6193152523214285
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure