Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCGATTCCGCGGCTTCGAG
(((.(((((((((((..(((.&)))..)))..)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016033
GeneSymbolRMDN1
Binding site172,195
Score0.923
Seed0
Au0.412
Energy-21.1
Binding len23
Me-7.203
Phylopstem-0.022513592307692322
Phylopflank0.13767795375000003
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure