Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCCATGTTGGCCAGGC
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016037
GeneSymbolUTP11
Binding site1234,1253
Score0.846
Seed1
Au0.5
Energy-18.7
Binding len19
Me-9.309
Phylopstem0.205622
Phylopflank0.046924851250000024
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure