Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACTGCGGACTGCAGT
((((((((((((((.......&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016037
GeneSymbolUTP11
Binding site1647,1663
Score0.923
Seed1
Au0.324
Energy-20.0
Binding len16
Me-4.906
Phylopstem-0.4276459333333333
Phylopflank-0.13808290250000005
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end1
Position3UTR
2D Structure