Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAACAATGGCTAATTCTTTTAACTGTTAAAAATATGCCAGGC
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016039
GeneSymbolRTRAF
Binding site3841,3884
Score0.923
Seed1
Au0.618
Energy-15.8
Binding len11
Me-13.079
Phylopstem0.5714774044444445
Phylopflank-0.432620939
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure