Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACACAGGATGCAGTTGCT
..(((((((((.((((.((((&))))...))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016039
GeneSymbolRTRAF
Binding site581,604
Score0.949
Seed1
Au0.529
Energy-20.7
Binding len23
Me-8.304
Phylopstem4.601804111111111
Phylopflank4.7537267475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure