Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCTGCTTCTGCACTGCT
..((((.(((((..(((((((&))))...)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016040
GeneSymbolTMED5
Binding site4283,4305
Score0.846
Seed0
Au0.529
Energy-19.1
Binding len22
Me-8.647
Phylopstem0.5938647999999999
Phylopflank0.34942647574999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure