Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAATTGCAACACCAGTCTGTT
..(((((((..((((((((((&))))...))))))..))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016040
GeneSymbolTMED5
Binding site1175,1199
Score0.846
Seed1
Au0.647
Energy-18.9
Binding len24
Me-9.024
Phylopstem0.3064077953846154
Phylopflank-0.10439713012500001
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure