Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGCGGCTGCGGA
((((((((((.(.(((.....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016048
GeneSymbolISOC1
Binding site16,32
Score0.846
Seed1
Au0.262
Energy-19.5
Binding len16
Me-8.051
Phylopstem1.8868638500000003
Phylopflank0.6944426627272727
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure