Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGATGACATCCGGCAGGACTGGACCAACCAGCGGCTCAAC
(((.(((((((((((((((((&))))))......................))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016049
GeneSymbolEMC9
Binding site698,742
Score0.846
Seed0
Au0.412
Energy-19.7
Binding len44
Me-6.97
Phylopstem-0.037055294999999974
Phylopflank1.0898374837500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure