Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGTTGATTCACCCTCAGGCTACCAGACAGTTGCC
..(((((((((((((((((((&))))))))))))........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016052
GeneSymbolRRP15
Binding site6281,6325
Score1.0
Seed1
Au0.515
Energy-24.2
Binding len44
Me-4.957
Phylopstem1.68860528372093
Phylopflank0.8812022587499998
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure