Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTGCAGATGTGTATATGTATGTGTGTGTGAGA
..((.(((((((..((((((((&))))))))....................))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016055
GeneSymbolMRPL48
Binding site952,991
Score0.846
Seed0
Au0.574
Energy-16.2
Binding len39
Me-11.222
Phylopstem0.5593944375
Phylopflank0.01972696499999993
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end8
Position3UTR
2D Structure