Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGGAACGCGGCTGCAGG
(((((((((((.((.((.(((&))).)).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016055
GeneSymbolMRPL48
Binding site30,52
Score0.923
Seed1
Au0.397
Energy-25.1
Binding len22
Me-8.02
Phylopstem0.2191157272727273
Phylopflank0.33656469999999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure