Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCTCTTTTGTGGATATTGTGCCTGTCAGGA
.(((((((((((((((......&.))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016056
GeneSymbolTMBIM4
Binding site512,546
Score0.846
Seed1
Au0.632
Energy-17.1
Binding len19
Me-3.793
Phylopstem0.22020027764705882
Phylopflank-0.03139524225000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end2
PositionCDS
2D Structure