Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACACCCAAGCAGTAGGTCTGTGCT
..((((((((((.((((((((&)))))))).))..))))).......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016057
GeneSymbolCOPZ1
Binding site1528,1557
Score0.846
Seed1
Au0.426
Energy-20.3
Binding len29
Me-6.246
Phylopstem0.516685589473684
Phylopflank0.2549762975
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure