Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTGGCGTTTTGGTGTCTTCGTTTGTTATGGCCGCTGCTGTC
..(((((.((((((((((.(.&.).)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016060
GeneSymbolMED31
Binding site47,92
Score0.923
Seed0
Au0.485
Energy-21.8
Binding len20
Me-7.271
Phylopstem-0.11310643000000001
Phylopflank0.23313086975000002
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure