Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGAGGCAGAAAGAAGCACTAACATAGCTGCAGCTGCC
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016063
GeneSymbolHDDC2
Binding site592,632
Score1.0
Seed1
Au0.485
Energy-24.6
Binding len16
Me-4.957
Phylopstem-0.3290236428571428
Phylopflank0.08299195875000004
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure