Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCTGGGTGGCTGCAC
.(((((((((....(((((((&))))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016065
GeneSymbolMRPS16
Binding site220,242
Score0.846
Seed1
Au0.368
Energy-23.3
Binding len22
Me-12.111
Phylopstem0.3153863333333333
Phylopflank0.020603525000000025
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure