Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCGACCGTACTGGGGCTGA
...(((((((((((((.((((&))))..)))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016070
GeneSymbolMRPS23
Binding site2684,2709
Score0.923
Seed0
Au0.544
Energy-22.3
Binding len25
Me-6.515
Phylopstem-0.10123766666666667
Phylopflank0.03353032124999998
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure