Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCACTGTGTTAGCCAGGA
.(((((((((((.((.((((..&)))))).)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016071
GeneSymbolMRPS33
Binding site2782,2803
Score0.923
Seed1
Au0.544
Energy-18.9
Binding len21
Me-5.316
Phylopstem-0.22372230769230772
Phylopflank-0.09592141250000001
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure