Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACGTCTGACATGAATGAGGTAATGCCCCTGCGGCTGCCAGCTGCT
..(((((((((((((((.(((&.)))..))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016073
GeneSymbolHDGFL3
Binding site9865,9915
Score0.923
Seed1
Au0.426
Energy-25.8
Binding len23
Me-4.957
Phylopstem0.023690187500000008
Phylopflank0.04986144249999999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure