Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGGAGTCCGAGGCTGCGGT
((((((((.(((((.(.((((&)))).).)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016073
GeneSymbolHDGFL3
Binding site11363,11386
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len23
Me-5.729
Phylopstem3.2173725
Phylopflank2.5010851825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure