Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGACCCTCAGCTGCAGA
(((((((((.((((.(..(((&))).).))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016075
GeneSymbolVPS36
Binding site2495,2517
Score0.923
Seed1
Au0.382
Energy-21.6
Binding len22
Me-5.916
Phylopstem-0.05031544444444442
Phylopflank0.31108518749999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure