Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGGCTGGTGGCTGCAT
.((((((((((((((..(((.&)))..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016079
GeneSymbolCHMP3
Binding site1354,1375
Score0.923
Seed1
Au0.456
Energy-20.0
Binding len21
Me-4.026
Phylopstem0.05314191333333333
Phylopflank0.12837636125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure