Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCACCGCAAGGTCTCGGTGCAGTACTGCGACGTGCTGCAC
.(((((((((((.(((.((((&)))))))))))).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016084
GeneSymbolRASD1
Binding site824,868
Score0.846
Seed1
Au0.397
Energy-21.3
Binding len44
Me-5.082
Phylopstem1.549674602777778
Phylopflank3.7688232774999992
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure