Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTCCATGGATACAAGTGTATGCGCCAGGG
.(((((((((((.((((.....&.))))..)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016085
GeneSymbolATRAID
Binding site704,736
Score0.846
Seed1
Au0.5
Energy-17.3
Binding len21
Me-5.082
Phylopstem3.126406076923077
Phylopflank1.95784997175
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure