Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGCTCTGTCATTCTGATCTTTTCCACCCAAGGTATCAGCCGCAGTTGTG
..(((((((((((((......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016086
GeneSymbolSTYXL1
Binding site1049,1103
Score1.0
Seed1
Au0.5
Energy-23.1
Binding len15
Me-5.19
Phylopstem2.2306646153846157
Phylopflank1.42769907875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure