Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTCCAGTCTCCTCCTCAGTTCTGTGCCTGAGAACCACTGCTGCAT
.((((((.(.((((.(.((((&.)))).).)))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016100
GeneSymbolNAA20
Binding site863,912
Score0.846
Seed1
Au0.632
Energy-22.1
Binding len22
Me-8.085
Phylopstem0.5830914833333333
Phylopflank0.8216988612500002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure