Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCGGCGCGAT
((((.(((((.(((((.....&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016100
GeneSymbolNAA20
Binding site21,37
Score0.846
Seed0
Au0.318
Energy-19.5
Binding len16
Me-10.881
Phylopstem0.12181279999999997
Phylopflank1.5667717248863628
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure