Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGACCGGCAGGGTCACTCTCTGGAGCTGCTGCTGCTGCAGCTGGAGG
((.((((((((((.(((.(((&.)))..))).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016102
GeneSymbolTRIM17
Binding site1034,1085
Score0.846
Seed0
Au0.338
Energy-23.6
Binding len24
Me-6.352
Phylopstem0.36405
Phylopflank0.47937686375000005
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure