Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCCCAGCTGTGAC
(((((((((.(((((......&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016112
GeneSymbolPKD2L1
Binding site2406,2422
Score0.846
Seed1
Au0.324
Energy-19.8
Binding len16
Me-5.413
Phylopstem3.376637222222222
Phylopflank2.6566612787499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure