Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCAGGAGCAGCTGCAC
.(((((((((..(((.(((((&))))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016113
GeneSymbolTRPV2
Binding site2200,2221
Score0.846
Seed1
Au0.338
Energy-25.3
Binding len21
Me-10.198
Phylopstem1.529449018888889
Phylopflank4.430645956375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure