Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGACGCGCAGCTGGGAG
((.((((((((((((......&)))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016113
GeneSymbolTRPV2
Binding site282,299
Score1.0
Seed0
Au0.368
Energy-21.5
Binding len17
Me-5.728
Phylopstem-1.3949379999999998
Phylopflank0.18642598312500003
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure