Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGCCGAGTGGATTGAGTGCCAGGTG
(((((((((.((((.((.....&.)).)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016118
GeneSymbolNUB1
Binding site2851,2879
Score0.923
Seed1
Au0.412
Energy-20.5
Binding len19
Me-5.916
Phylopstem-0.24593807777777782
Phylopflank-0.40836490000000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure