Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCACAACTGGATTGTAGCTGCAT
.(((((((((((((((..(((&)))...)))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016121
GeneSymbolKCTD3
Binding site956,983
Score0.885
Seed1
Au0.574
Energy-21.9
Binding len27
Me-3.793
Phylopstem5.908232949999999
Phylopflank4.9408252374999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure