Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCAGTTGTCAGCAAGCAGGAAAAAAAAATTGGGACCTCAGTTGCAAC
(((((((((.((((.(((...&.))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016123
GeneSymbolIRAK4
Binding site2283,2335
Score1.0
Seed1
Au0.588
Energy-21.4
Binding len20
Me-5.916
Phylopstem-0.11866666666666667
Phylopflank-0.21960000000000013
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure