Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCCTGGGCTGACAC
.(((((((..((((((..(((&)))))))))..))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016123
GeneSymbolIRAK4
Binding site2402,2422
Score0.923
Seed1
Au0.5
Energy-19.1
Binding len20
Me-6.092
Phylopstem-0.11999999999999998
Phylopflank-0.0102
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure