Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACTTCAGCTTGCT
..(((((((.(((((((....&))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016124
GeneSymbolRHD
Binding site1026,1043
Score1.0
Seed1
Au0.485
Energy-18.4
Binding len17
Me-6.2
Phylopstem0.6677406142857143
Phylopflank1.22674548125
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure