Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTCAGAATTCCGCTATCTCTTCAAGTGGCTGCAAA
(((((((((((((((.((((.&))))..)))....)))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016125
GeneSymbolRNFT1
Binding site495,534
Score0.923
Seed1
Au0.603
Energy-19.0
Binding len39
Me-4.171
Phylopstem0.49347949375000005
Phylopflank0.65682660125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure