Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCAAGCCAATCGTAGCCAACTGCAC
.((((((((((((((((.(((&))).)))).....))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016125
GeneSymbolRNFT1
Binding site185,215
Score0.846
Seed1
Au0.485
Energy-18.6
Binding len30
Me-3.793
Phylopstem0.9594767200000001
Phylopflank1.5383641675
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure