Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACAGCTGTGGCCTGCAC
.(((((((((((((((..(((&)))..))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016128
GeneSymbolCOPG1
Binding site2250,2272
Score0.833
Seed1
Au0.456
Energy-23.7
Binding len22
Me-3.793
Phylopstem4.6223899374999995
Phylopflank5.108540271999999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure