Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCCGTCAGCTGTGAC
((((((((((((.(((.....&))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016128
GeneSymbolCOPG1
Binding site1054,1072
Score0.962
Seed1
Au0.5
Energy-20.5
Binding len18
Me-5.227
Phylopstem4.7790265384615385
Phylopflank5.531753544000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure