Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCACAGATTCAAACCGCAGCATTGCC
..((((((((((((...((((&)))).............)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016128
GeneSymbolCOPG1
Binding site1095,1127
Score0.808
Seed1
Au0.441
Energy-20.4
Binding len32
Me-5.925
Phylopstem5.751462131428572
Phylopflank5.8072333249999994
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure