Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGC
((((.(((((((((((.....&.)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016132
GeneSymbolMYEF2
Binding site153,199
Score1.0
Seed0
Au0.397
Energy-24.6
Binding len20
Me-8.057
Phylopstem1.2930143636363638
Phylopflank0.7067668562499998
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure