Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGTAGGAATTGCCTTCTTGGCAACTGTGGTCACTCAACTGCT
..(((((((((((((((((((&.)))))....))))))))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016133
GeneSymbolINSIG2
Binding site675,724
Score0.923
Seed1
Au0.618
Energy-19.4
Binding len33
Me-4.957
Phylopstem4.808954612903226
Phylopflank5.076541225
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure