Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACGCTCCTGCCACCTCATTATTTTGCATTGAAGATACATTGCCAGGTT
((((((((..(((((((((...&.))))))))).........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016144
GeneSymbolCOMMD10
Binding site660,711
Score0.846
Seed1
Au0.603
Energy-20.2
Binding len28
Me-6.236
Phylopstem0.7491374444444444
Phylopflank2.6431148925
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure