Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTTACAGCCAGGCATTCCTGCT
..((((.((((((((((((((&)).)))))))))..)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016146
GeneSymbolTRAPPC4
Binding site1217,1242
Score0.846
Seed0
Au0.559
Energy-20.9
Binding len25
Me-6.501
Phylopstem0.2488689588235294
Phylopflank-0.10784710999999997
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure